J3_4WT8_034
3D structure
- PDB id
- 4WT8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complex
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.4 Å
Loop
- Sequence
- UG*CGCCGAUGG*CAG
- Length
- 14 nucleotides
- Bulged bases
- 4WT8|1|Ab|U|707
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_4WT8_034 not in the Motif Atlas
- Homologous match to J3_5J7L_003
- Geometric discrepancy: 0.1586
- The information below is about J3_5J7L_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_11934.4
- Basepair signature
- cWW-cWW-tWW-cWW-F-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
4WT8|1|Ab|U|656
4WT8|1|Ab|G|657
*
4WT8|1|Ab|C|701
4WT8|1|Ab|G|702
4WT8|1|Ab|C|703
4WT8|1|Ab|C|704
4WT8|1|Ab|G|705
4WT8|1|Ab|A|706
4WT8|1|Ab|U|707
4WT8|1|Ab|G|708
4WT8|1|Ab|G|709
*
4WT8|1|Ab|C|716
4WT8|1|Ab|A|717
4WT8|1|Ab|G|718
Current chains
- Chain Ab
- RNA (1504-MER)
Nearby chains
- Chain AF
- 30S ribosomal protein S6
- Chain AK
- 30S ribosomal protein S11
- Chain AO
- 30S ribosomal protein S15
- Chain AS
- 30S ribosomal protein S18
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