J3_4WWW_068
3D structure
- PDB id
- 4WWW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the E. coli ribosome bound to CEM-101
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- GC*GCGAAAAG*CC
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_4WWW_068 not in the Motif Atlas
- Geometric match to J3_8VTW_036
- Geometric discrepancy: 0.1787
- The information below is about J3_8VTW_036
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_69021.1
- Basepair signature
- cWW-tWH-cWW-tSH-F-cWW-F
- Number of instances in this motif group
- 7
Unit IDs
4WWW|1|YA|G|30
4WWW|1|YA|C|31
*
4WWW|1|YA|G|474
4WWW|1|YA|C|475
4WWW|1|YA|G|476
4WWW|1|YA|A|477
4WWW|1|YA|A|478
4WWW|1|YA|A|479
4WWW|1|YA|A|480
4WWW|1|YA|G|481
*
4WWW|1|YA|C|509
4WWW|1|YA|C|510
Current chains
- Chain YA
- 23S rRNA
Nearby chains
- Chain YQ
- 50S ribosomal protein L20
- Chain YU
- 50S ribosomal protein L24
Coloring options: