J3_4WZO_077

3D structure

PDB id

4WZO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex of 70S ribosome with tRNA-fMet and mRNA

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

CUUGACAU*ACAG*CUUACG

Length

18 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_4WZO_077 not in the Motif Atlas

Homologous match to J3_4LFB_016

Geometric discrepancy: 0.2111

The information below is about J3_4LFB_016

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_76475.2

Basepair signature

cWW-tWH-F-tHS-cWW-cWW-F-cWS-cWS-cWW

Number of instances in this motif group

2

Unit IDs

4WZO|1|1G|C|990
4WZO|1|1G|U|991
4WZO|1|1G|U|992
4WZO|1|1G|G|993
4WZO|1|1G|A|994
4WZO|1|1G|C|995
4WZO|1|1G|A|996
4WZO|1|1G|U|997
*
4WZO|1|1G|A|1044
4WZO|1|1G|C|1045
4WZO|1|1G|A|1046
4WZO|1|1G|G|1047
*
4WZO|1|1G|C|1210
4WZO|1|1G|U|1211
4WZO|1|1G|U|1212
4WZO|1|1G|A|1213
4WZO|1|1G|C|1214
4WZO|1|1G|G|1215

Current chains

Chain 1G

16S ribosomal RNA

Nearby chains

Chain 5A

30S ribosomal protein S14 type Z