J3_4Z3S_071

3D structure

PDB id

4Z3S (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.65 Å

Loop

Sequence

CUUGACAU*ACAG*CUUACG

Length

18 nucleotides

Bulged bases

4Z3S|1|2a|C|1214

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_4Z3S_071 not in the Motif Atlas

Homologous match to J3_4LFB_016

Geometric discrepancy: 0.1677

The information below is about J3_4LFB_016

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_76475.2

Basepair signature

cWW-tWH-F-tHS-cWW-cWW-F-cWS-cWS-cWW

Number of instances in this motif group

2

Unit IDs

4Z3S|1|2a|C|990
4Z3S|1|2a|U|991
4Z3S|1|2a|U|992
4Z3S|1|2a|G|993
4Z3S|1|2a|A|994
4Z3S|1|2a|C|995
4Z3S|1|2a|A|996
4Z3S|1|2a|U|997
*
4Z3S|1|2a|A|1044
4Z3S|1|2a|C|1045
4Z3S|1|2a|A|1046
4Z3S|1|2a|G|1047
*
4Z3S|1|2a|C|1210
4Z3S|1|2a|U|1211
4Z3S|1|2a|U|1212
4Z3S|1|2a|A|1213
4Z3S|1|2a|C|1214
4Z3S|1|2a|G|1215

Current chains

Chain 2a

16S Ribosomal RNA

Nearby chains

Chain 2n

30S ribosomal protein S14 type Z