J3_4ZSN_032

3D structure

PDB id

4ZSN (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S-wild-type HigB toxin complex bound to a AAA lysine codon

Experimental method

X-RAY DIFFRACTION

Resolution

3.6 Å

Loop

Sequence

CUAG*CGAAG*CGUUAAG

Length

16 nucleotides

Bulged bases

4ZSN|1|XA|U|871

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_4ZSN_032 not in the Motif Atlas

Homologous match to J3_4LFB_001

Geometric discrepancy: 0.0968

The information below is about J3_4LFB_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_02285.1

Basepair signature

cWW-tWW-tHS-F-cWW-tHS-cWW-F

Number of instances in this motif group

2

Unit IDs

4ZSN|1|XA|C|826
4ZSN|1|XA|U|827
4ZSN|1|XA|A|828
4ZSN|1|XA|G|829
*
4ZSN|1|XA|C|857
4ZSN|1|XA|G|858
4ZSN|1|XA|A|859
4ZSN|1|XA|A|860
4ZSN|1|XA|G|861
*
4ZSN|1|XA|C|868
4ZSN|1|XA|G|869
4ZSN|1|XA|U|870
4ZSN|1|XA|U|871
4ZSN|1|XA|A|872
4ZSN|1|XA|A|873
4ZSN|1|XA|G|874

Current chains

Chain XA

16S rRNA

Nearby chains

Chain XB

30S ribosomal protein S2

Chain XH

30S ribosomal protein S8