J3_5CZP_069

3D structure

PDB id

5CZP (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S termination complex containing E. coli RF2

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

CUUGACAU*ACAG*CUUACG

Length

18 nucleotides

Bulged bases

5CZP|1|XA|C|1214

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_5CZP_069 not in the Motif Atlas

Homologous match to J3_4LFB_016

Geometric discrepancy: 0.1405

The information below is about J3_4LFB_016

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_28881.1

Basepair signature

cWW-tWH-F-F-cWW-cWW-F-F-F-cWS-cWW

Number of instances in this motif group

2

Unit IDs

5CZP|1|XA|C|990
5CZP|1|XA|U|991
5CZP|1|XA|U|992
5CZP|1|XA|G|993
5CZP|1|XA|A|994
5CZP|1|XA|C|995
5CZP|1|XA|A|996
5CZP|1|XA|U|997
*
5CZP|1|XA|A|1044
5CZP|1|XA|C|1045
5CZP|1|XA|A|1046
5CZP|1|XA|G|1047
*
5CZP|1|XA|C|1210
5CZP|1|XA|U|1211
5CZP|1|XA|U|1212
5CZP|1|XA|A|1213
5CZP|1|XA|C|1214
5CZP|1|XA|G|1215

Current chains

Chain XA

16S rRNA

Nearby chains

Chain XN

30S ribosomal protein S14 type Z

Chain XY

Peptide chain release factor 2