J3_5FCJ_033
3D structure
- PDB id
- 5FCJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the anisomycin-containing uL3 W255C mutant 80S yeast ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- AUCA*UAACUACUG*CAUUU
- Length
- 18 nucleotides
- Bulged bases
- 5FCJ|1|6|C|934
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_5FCJ_033 not in the Motif Atlas
- Homologous match to J3_8P9A_074
- Geometric discrepancy: 0.0507
- The information below is about J3_8P9A_074
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_23895.1
- Basepair signature
- cWW-cWW-cWW-cWW-tWW-cWW-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
5FCJ|1|6|A|881
5FCJ|1|6|U|882
5FCJ|1|6|C|883
5FCJ|1|6|A|884
*
5FCJ|1|6|U|928
5FCJ|1|6|A|929
5FCJ|1|6|A|930
5FCJ|1|6|C|931
5FCJ|1|6|U|932
5FCJ|1|6|A|933
5FCJ|1|6|C|934
5FCJ|1|6|U|935
5FCJ|1|6|G|936
*
5FCJ|1|6|C|943
5FCJ|1|6|A|944
5FCJ|1|6|U|945
5FCJ|1|6|U|946
5FCJ|1|6|U|947
Current chains
- Chain 6
- 18S ribosomal RNA
Nearby chains
- Chain c3
- 40S ribosomal protein S13
- Chain c4
- 40S ribosomal protein S14-A
- Chain d6
- 40S ribosomal protein S26-B
- Chain q3
- 60S ribosomal protein L43-A
- Chain s1
- 40S ribosomal protein S1-A
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