J3_5LZU_028
3D structure
- PDB id
- 5LZU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the mammalian ribosomal termination complex with accommodated eRF1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.75 Å
Loop
- Sequence
- CCGGAC*GGGUG*UUAGAUG
- Length
- 18 nucleotides
- Bulged bases
- 5LZU|1|9|G|1507, 5LZU|1|9|U|1509
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_5LZU_028 not in the Motif Atlas
- Homologous match to J3_8C3A_041
- Geometric discrepancy: 0.1551
- The information below is about J3_8C3A_041
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_23728.1
- Basepair signature
- cWW-tWH-F-F-tHS-cWW-cWW-cWW-F
- Number of instances in this motif group
- 2
Unit IDs
5LZU|1|9|C|1272
5LZU|1|9|C|1273
5LZU|1|9|G|1274
5LZU|1|9|G|1275
5LZU|1|9|A|1276
5LZU|1|9|C|1277
*
5LZU|1|9|G|1320
5LZU|1|9|G|1321
5LZU|1|9|G|1322
5LZU|1|9|U|1323
5LZU|1|9|G|1324
*
5LZU|1|9|U|1504
5LZU|1|9|U|1505
5LZU|1|9|A|1506
5LZU|1|9|G|1507
5LZU|1|9|A|1508
5LZU|1|9|U|1509
5LZU|1|9|G|1510
Current chains
- Chain 9
- 18S ribosomal RNA
Nearby chains
- Chain KK
- eS10
- Chain dd
- uS14
- Chain ff
- eS31
- Chain ii
- Eukaryotic peptide chain release factor subunit 1
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