J3_5LZY_001

3D structure

PDB id

5LZY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the mammalian rescue complex with Pelota and Hbs1l assembled on a polyadenylated mRNA.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.99 Å

Loop

Sequence

CAGCG*CGUACG*CCGG

Length

15 nucleotides

Bulged bases

5LZY|1|5|C|159

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LZY|1|5|C|112
5LZY|1|5|A|113
5LZY|1|5|G|114
5LZY|1|5|C|115
5LZY|1|5|G|116
*
5LZY|1|5|C|155
5LZY|1|5|G|156
5LZY|1|5|U|157
5LZY|1|5|A|158
5LZY|1|5|C|159
5LZY|1|5|G|160
*
5LZY|1|5|C|275
5LZY|1|5|C|276
5LZY|1|5|G|277
5LZY|1|5|G|278

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain G

eL8

Chain L

eL13

Chain N

Ribosomal protein L15

Chain h

uL29

Chain i

60S ribosomal protein L36