J3_5LZY_011

3D structure

PDB id

5LZY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the mammalian rescue complex with Pelota and Hbs1l assembled on a polyadenylated mRNA.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.99 Å

Loop

Sequence

AGAUG*CAGU*AGGGUGUAAAU

Length

20 nucleotides

Bulged bases

5LZY|1|5|U|2763

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LZY|1|5|A|2551
5LZY|1|5|G|2552
5LZY|1|5|A|2553
5LZY|1|5|U|2554
5LZY|1|5|G|2555
*
5LZY|1|5|C|2572
5LZY|1|5|A|2573
5LZY|1|5|G|2574
5LZY|1|5|U|2575
*
5LZY|1|5|A|2757
5LZY|1|5|G|2758
5LZY|1|5|G|2759
5LZY|1|5|G|2760
5LZY|1|5|U|2761
5LZY|1|5|G|2762
5LZY|1|5|U|2763
5LZY|1|5|A|2764
5LZY|1|5|A|2765
5LZY|1|5|A|2766
5LZY|1|5|U|2767

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain Z

60S ribosomal protein L27