J3_5M73_003
3D structure
- PDB id
- 5M73 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the human SRP S domain with SRP72 RNA-binding domain
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.4 Å
Loop
- Sequence
- UC*GCCUAAGGAG*CCG
- Length
- 15 nucleotides
- Bulged bases
- 5M73|1|A|C|169, 5M73|1|A|A|176
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_5M73_003 not in the Motif Atlas
- Geometric match to J3_6MWN_002
- Geometric discrepancy: 0.3694
- The information below is about J3_6MWN_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_93059.1
- Basepair signature
- cWW-tWH-cWW-tSH-F-cWW-cWW
- Number of instances in this motif group
- 1
Unit IDs
5M73|1|A|U|128
5M73|1|A|C|129
*
5M73|1|A|G|168
5M73|1|A|C|169
5M73|1|A|C|170
5M73|1|A|U|171
5M73|1|A|A|172
5M73|1|A|A|173
5M73|1|A|G|174
5M73|1|A|G|175
5M73|1|A|A|176
5M73|1|A|G|177
*
5M73|1|A|C|220
5M73|1|A|C|221
5M73|1|A|G|222
Current chains
- Chain A
- Human gene for small cytoplasmic 7SL RNA (7L30.1)
Nearby chains
- Chain C
- Signal recognition particle subunit SRP68
Coloring options: