5M73 Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_5M73_001 | 1/A/146:151 | GNRA variation | ||
| HL_5M73_002 | 1/A/197:202 | GNRA | ||
| HL_5M73_003 | 1/E/146:151 | GNRA variation | homologous HL_1MFQ_001 HL_37824.7 | |
| HL_5M73_004 | 1/E/197:202 | GNRA | homologous HL_1MFQ_002 HL_37824.7 |
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_5M73_001 | 1/A/110:111, 1/A/239:243 | No text annotation | ||
| IL_5M73_002 | 1/A/112:114, 1/A/237:238 | Single bulged G | ||
| IL_5M73_003 | 1/A/118:120, 1/A/230:233 | Isolated non-canonical cWW pair | geometric IL_5TBW_042 NA | |
| IL_5M73_004 | 1/A/120:122, 1/A/228:230 | Isolated non-canonical cWW pair | homologous IL_1MFQ_002 IL_28037.2 | |
| IL_5M73_005 | 1/A/132:134, 1/A/163:165 | Isolated non-canonical cWW pair | homologous IL_1MFQ_003 IL_87907.2 | |
| IL_5M73_006 | 1/A/138:141, 1/A/156:159 | Tandem non-canonical cWW pairs | homologous IL_1MFQ_004 IL_85033.2 | |
| IL_5M73_007 | 1/A/175:177, 1/A/220:221 | Single bulged A | ||
| IL_5M73_008 | 1/A/180:187, 1/A/212:217 | No text annotation | ||
| IL_5M73_009 | 1/A/190:195, 1/A/204:209 | tSH-tHW-tHS-cWW | homologous IL_1MFQ_007 IL_76308.6 | |
| IL_5M73_010 | 1/E/110:111, 1/E/239:243 | No text annotation | ||
| IL_5M73_011 | 1/E/112:114, 1/E/237:238 | No text annotation | ||
| IL_5M73_012 | 1/E/117:120, 1/E/230:234 | Tandem non-canonical cWW pairs | geometric IL_6CZR_168 NA | |
| IL_5M73_013 | 1/E/120:122, 1/E/228:230 | Isolated non-canonical cWW pair | homologous IL_1MFQ_002 IL_28037.2 | |
| IL_5M73_014 | 1/E/132:134, 1/E/163:165 | Isolated non-canonical cWW pair | homologous IL_1MFQ_003 IL_87907.2 | |
| IL_5M73_019 | 1/E/138:141, 1/E/156:159 | Tandem non-canonical cWW pairs | homologous IL_1MFQ_004 IL_85033.2 | |
| IL_5M73_016 | 1/E/175:177, 1/E/220:221 | Single bulged A | homologous IL_1MFQ_005 IL_31462.6 | |
| IL_5M73_017 | 1/E/180:187, 1/E/212:217 | No text annotation | ||
| IL_5M73_018 | 1/E/190:195, 1/E/204:209 | tSH-tHW-tHS-cWW | homologous IL_1MFQ_007 IL_76308.6 |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| IL_5M73_015 | No text annotation |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J3_5M73_001 | 1/A/128:129, 1/A/168:175, 1/A/221:222 | No text annotation | geometric J3_1MFQ_002 J3_70599.1 | |
| J3_5M73_003 | 1/A/128:129, 1/A/168:177, 1/A/220:222 | No text annotation | geometric J3_6MWN_002 J3_93059.1 | |
| J3_5M73_002 | 1/E/128:129, 1/E/168:175, 1/E/221:222 | No text annotation | geometric J3_1MFQ_002 J3_70599.1 | |
| J3_5M73_004 | 1/E/128:129, 1/E/168:177, 1/E/220:222 | No text annotation | geometric J3_6MWN_002 J3_93059.1 |
Problematic loops
No problematic loops
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