J3_5MMI_003
3D structure
- PDB id
- 5MMI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the large subunit of the chloroplast ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- UGAUCUA*UAG*CGAA
- Length
- 14 nucleotides
- Bulged bases
- 5MMI|1|A|U|697
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_5MMI_003 not in the Motif Atlas
- Homologous match to J3_4WF9_002
- Geometric discrepancy: 0.0877
- The information below is about J3_4WF9_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_46658.1
- Basepair signature
- cWW-tWH-cWW-tSW-F-F-cWW
- Number of instances in this motif group
- 10
Unit IDs
5MMI|1|A|U|694
5MMI|1|A|G|695
5MMI|1|A|A|696
5MMI|1|A|U|697
5MMI|1|A|C|698
5MMI|1|A|U|699
5MMI|1|A|A|700
*
5MMI|1|A|U|784
5MMI|1|A|A|785
5MMI|1|A|G|786
*
5MMI|1|A|C|802
5MMI|1|A|G|803
5MMI|1|A|A|804
5MMI|1|A|A|805
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain 3
- 50S ribosomal protein L34, chloroplastic
- Chain C
- 50S ribosomal protein L2, chloroplastic
- Chain E
- plastid ribosomal protein uL4c
Coloring options: