J3_5MRC_020
3D structure
- PDB id
- 5MRC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the yeast mitochondrial ribosome - Class A
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.25 Å
Loop
- Sequence
- CAA*UAAA*UGAAAG
- Length
- 13 nucleotides
- Bulged bases
- 5MRC|1|aa|A|938
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_5MRC_020 not in the Motif Atlas
- Geometric match to J3_7A0S_007
- Geometric discrepancy: 0.2778
- The information below is about J3_7A0S_007
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_47341.1
- Basepair signature
- cWW-tHH-F-tHW-tHS-tWW-cWW-cWW-F
- Number of instances in this motif group
- 4
Unit IDs
5MRC|1|aa|C|891
5MRC|1|aa|A|892
5MRC|1|aa|A|893
*
5MRC|1|aa|U|924
5MRC|1|aa|A|925
5MRC|1|aa|A|926
5MRC|1|aa|A|927
*
5MRC|1|aa|U|934
5MRC|1|aa|G|935
5MRC|1|aa|A|936
5MRC|1|aa|A|937
5MRC|1|aa|A|938
5MRC|1|aa|G|939
Current chains
- Chain aa
- 15S ribosomal RNA
Nearby chains
- Chain BB
- uS2m
- Chain EE
- uS5m
- Chain HH
- uS8m
- Chain UU
- mS23
- Chain ZZ
- mS37
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