J3_5T7V_036

3D structure

PDB id

5T7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Methicillin Resistant, Linezolid resistant Staphylococcus aureus 70S ribosome (delta S145 uL3)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

UGAUCUA*UAG*CGAA

Length

14 nucleotides

Bulged bases

5T7V|1|B|U|731, 5T7V|1|B|G|837, 5T7V|1|B|A|838

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_5T7V_036 not in the Motif Atlas

Homologous match to J3_4WF9_002

Geometric discrepancy: 0.1579

The information below is about J3_4WF9_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_64189.2

Basepair signature

cWW-tWH-cWW-tSW-F-F-cWW

Number of instances in this motif group

7

Unit IDs

5T7V|1|B|U|728
5T7V|1|B|G|729
5T7V|1|B|A|730
5T7V|1|B|U|731
5T7V|1|B|C|732
5T7V|1|B|U|733
5T7V|1|B|A|734
*
5T7V|1|B|U|818
5T7V|1|B|A|819
5T7V|1|B|G|820
*
5T7V|1|B|C|836
5T7V|1|B|G|837
5T7V|1|B|A|838
5T7V|1|B|A|839

Current chains

Chain B

23S ribosomal RNA

Nearby chains

Chain L2

50S ribosomal protein L2

Chain LG

50S ribosomal protein L34