J3_5T7V_036
3D structure
- PDB id
- 5T7V (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Methicillin Resistant, Linezolid resistant Staphylococcus aureus 70S ribosome (delta S145 uL3)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- UGAUCUA*UAG*CGAA
- Length
- 14 nucleotides
- Bulged bases
- 5T7V|1|B|U|731, 5T7V|1|B|G|837, 5T7V|1|B|A|838
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_5T7V_036 not in the Motif Atlas
- Homologous match to J3_4WF9_002
- Geometric discrepancy: 0.1579
- The information below is about J3_4WF9_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_46658.1
- Basepair signature
- cWW-tWH-cWW-tSW-F-F-cWW
- Number of instances in this motif group
- 10
Unit IDs
5T7V|1|B|U|728
5T7V|1|B|G|729
5T7V|1|B|A|730
5T7V|1|B|U|731
5T7V|1|B|C|732
5T7V|1|B|U|733
5T7V|1|B|A|734
*
5T7V|1|B|U|818
5T7V|1|B|A|819
5T7V|1|B|G|820
*
5T7V|1|B|C|836
5T7V|1|B|G|837
5T7V|1|B|A|838
5T7V|1|B|A|839
Current chains
- Chain B
- 23S ribosomal RNA
Nearby chains
- Chain L2
- 50S ribosomal protein L2
- Chain LG
- 50S ribosomal protein L34
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