J3_5UZ4_012

3D structure

PDB id

5UZ4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

The cryo-EM structure of YjeQ bound to the 30S subunit suggests a fidelity checkpoint function for this protein in ribosome assembly

Experimental method

ELECTRON MICROSCOPY

Resolution

5.8 Å

Loop

Sequence

CAAUG*CGUAGUCC*GUCG

Length

17 nucleotides

Bulged bases

5UZ4|1|A|U|1240

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5UZ4|1|A|C|1237
5UZ4|1|A|A|1238
5UZ4|1|A|A|1239
5UZ4|1|A|U|1240
5UZ4|1|A|G|1241
*
5UZ4|1|A|C|1296
5UZ4|1|A|G|1297
5UZ4|1|A|U|1298
5UZ4|1|A|A|1299
5UZ4|1|A|G|1300
5UZ4|1|A|U|1301
5UZ4|1|A|C|1302
5UZ4|1|A|C|1303
*
5UZ4|1|A|G|1334
5UZ4|1|A|U|1335
5UZ4|1|A|C|1336
5UZ4|1|A|G|1337

Current chains

Chain A

16S RIBOSOMAL RNA

Nearby chains

Chain G

30S ribosomal protein S7

Chain M

30S ribosomal protein S13

Chain Z

Small ribosomal subunit biogenesis GTPase RsgA