3D structure

PDB id
5WE4 (explore in PDB, NAKB, or RNA 3D Hub)
Description
70S ribosome-EF-Tu wt complex with GppNHp
Experimental method
ELECTRON MICROSCOPY
Resolution
3.1 Å

Loop

Sequence
GGGACG*CC*GAAAAGC
Length
15 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J3_5WE4_029 not in the Motif Atlas
Homologous match to J3_5J7L_069
Geometric discrepancy: 0.0627
The information below is about J3_5J7L_069
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J3_34864.2
Basepair signature
cWW-F-cWW-F-tHH-F-tHS-tHS-cWW
Number of instances in this motif group
4

Unit IDs

5WE4|1|A|G|1424
5WE4|1|A|G|1425
5WE4|1|A|G|1426
5WE4|1|A|A|1427
5WE4|1|A|C|1428
5WE4|1|A|G|1429
*
5WE4|1|A|C|1564
5WE4|1|A|C|1565
*
5WE4|1|A|G|1568
5WE4|1|A|A|1569
5WE4|1|A|A|1570
5WE4|1|A|A|1571
5WE4|1|A|A|1572
5WE4|1|A|G|1573
5WE4|1|A|C|1574

Current chains

Chain A
23S rRNA

Nearby chains

Chain C
50S ribosomal protein L2

Coloring options:


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