J3_5WE4_034

3D structure

PDB id

5WE4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome-EF-Tu wt complex with GppNHp

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CUUGACAU*ACAG*CUUACG

Length

18 nucleotides

Bulged bases

5WE4|1|a|U|1212, 5WE4|1|a|C|1214

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_5WE4_034 not in the Motif Atlas

Homologous match to J3_4LFB_016

Geometric discrepancy: 0.1912

The information below is about J3_4LFB_016

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_76475.2

Basepair signature

cWW-tWH-F-tHS-cWW-cWW-F-cWS-cWS-cWW

Number of instances in this motif group

2

Unit IDs

5WE4|1|a|C|990
5WE4|1|a|U|991
5WE4|1|a|U|992
5WE4|1|a|G|993
5WE4|1|a|A|994
5WE4|1|a|C|995
5WE4|1|a|A|996
5WE4|1|a|U|997
*
5WE4|1|a|A|1044
5WE4|1|a|C|1045
5WE4|1|a|A|1046
5WE4|1|a|G|1047
*
5WE4|1|a|C|1210
5WE4|1|a|U|1211
5WE4|1|a|U|1212
5WE4|1|a|A|1213
5WE4|1|a|C|1214
5WE4|1|a|G|1215

Current chains

Chain a

16S rRNA

Nearby chains

Chain n

30S ribosomal protein S14