J3_5WE6_036

3D structure

PDB id

5WE6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome-EF-Tu H84A complex with GTP and cognate tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CUUGACAU*ACAG*CUUACG

Length

18 nucleotides

Bulged bases

5WE6|1|a|U|1212, 5WE6|1|a|C|1214

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_5WE6_036 not in the Motif Atlas

Homologous match to J3_4LFB_016

Geometric discrepancy: 0.2019

The information below is about J3_4LFB_016

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_28881.1

Basepair signature

cWW-tWH-F-F-cWW-cWW-F-F-F-cWS-cWW

Number of instances in this motif group

2

Unit IDs

5WE6|1|a|C|990
5WE6|1|a|U|991
5WE6|1|a|U|992
5WE6|1|a|G|993
5WE6|1|a|A|994
5WE6|1|a|C|995
5WE6|1|a|A|996
5WE6|1|a|U|997
*
5WE6|1|a|A|1044
5WE6|1|a|C|1045
5WE6|1|a|A|1046
5WE6|1|a|G|1047
*
5WE6|1|a|C|1210
5WE6|1|a|U|1211
5WE6|1|a|U|1212
5WE6|1|a|A|1213
5WE6|1|a|C|1214
5WE6|1|a|G|1215

Current chains

Chain a

16S rRNA

Nearby chains

Chain n

30S ribosomal protein S14