J3_5WFK_033

3D structure

PDB id

5WFK (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C3)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CUUGACAU*ACAG*CUUACG

Length

18 nucleotides

Bulged bases

5WFK|1|a|U|1212, 5WFK|1|a|C|1214

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_5WFK_033 not in the Motif Atlas

Homologous match to J3_4LFB_016

Geometric discrepancy: 0.2005

The information below is about J3_4LFB_016

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_28881.1

Basepair signature

cWW-tWH-F-F-cWW-cWW-F-F-F-cWS-cWW

Number of instances in this motif group

2

Unit IDs

5WFK|1|a|C|990
5WFK|1|a|U|991
5WFK|1|a|U|992
5WFK|1|a|G|993
5WFK|1|a|A|994
5WFK|1|a|C|995
5WFK|1|a|A|996
5WFK|1|a|U|997
*
5WFK|1|a|A|1044
5WFK|1|a|C|1045
5WFK|1|a|A|1046
5WFK|1|a|G|1047
*
5WFK|1|a|C|1210
5WFK|1|a|U|1211
5WFK|1|a|U|1212
5WFK|1|a|A|1213
5WFK|1|a|C|1214
5WFK|1|a|G|1215

Current chains

Chain a

16S rRNA

Nearby chains

Chain n

30S ribosomal protein S14