J3_5ZLU_002
3D structure
- PDB id
- 5ZLU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Ribosome Structure bound to ABC-F protein.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- CGGCC*GGCUAG*CG
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_5ZLU_002 not in the Motif Atlas
- Geometric match to J3_6CZR_059
- Geometric discrepancy: 0.2586
- The information below is about J3_6CZR_059
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_98561.1
- Basepair signature
- cWW-F-F-F-F-F-F-F-cWW-cWW
- Number of instances in this motif group
- 1
Unit IDs
5ZLU|1|G|C|586
5ZLU|1|G|G|587
5ZLU|1|G|G|588
5ZLU|1|G|C|589
5ZLU|1|G|C|590
*
5ZLU|1|G|G|649
5ZLU|1|G|G|650
5ZLU|1|G|C|651
5ZLU|1|G|U|652
5ZLU|1|G|A|653
5ZLU|1|G|G|654
*
5ZLU|1|G|C|754
5ZLU|1|G|G|755
Current chains
- Chain G
- 16S ribosomal RNA
Nearby chains
- Chain A
- 30S ribosomal protein S17
- Chain N
- 30S ribosomal protein S8
- Chain Q
- 30S ribosomal protein S12
- Chain T
- 30S ribosomal protein S15
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