J3_6AWC_007
3D structure
- PDB id
- 6AWC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of 30S ribosomal subunit and RNA polymerase complex in rotated state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 7.9 Å
Loop
- Sequence
- UGGA*UAC*GGAA
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6AWC_007 not in the Motif Atlas
- Homologous match to J3_4LFB_003
- Geometric discrepancy: 0.3577
- The information below is about J3_4LFB_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_52655.4
- Basepair signature
- cWW-tSH-cWW-F-cWW-cWW
- Number of instances in this motif group
- 4
Unit IDs
6AWC|1|A|U|943
6AWC|1|A|G|944
6AWC|1|A|G|945
6AWC|1|A|A|946
*
6AWC|1|A|U|1235
6AWC|1|A|A|1236
6AWC|1|A|C|1237
*
6AWC|1|A|G|1337
6AWC|1|A|G|1338
6AWC|1|A|A|1339
6AWC|1|A|A|1340
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain J
- 30S ribosomal protein S7
- Chain L
- 30S ribosomal protein S9
- Chain P
- 30S ribosomal protein S13
Coloring options: