J3_6BOK_049
3D structure
- PDB id
- 6BOK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.55 Å
Loop
- Sequence
- CC*GUGGAU*AAUCG
- Length
- 13 nucleotides
- Bulged bases
- 6BOK|1|EB|G|2833
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6BOK_049 not in the Motif Atlas
- Homologous match to J3_4WF9_021
- Geometric discrepancy: 0.2287
- The information below is about J3_4WF9_021
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_76911.2
- Basepair signature
- cWW-tHS-F-F-F-cWW-cWW
- Number of instances in this motif group
- 4
Unit IDs
6BOK|1|EB|C|2814
6BOK|1|EB|C|2815
*
6BOK|1|EB|G|2831
6BOK|1|EB|U|2832
6BOK|1|EB|G|2833
6BOK|1|EB|G|2834
6BOK|1|EB|A|2835
6BOK|1|EB|U|2836
*
6BOK|1|EB|A|2882
6BOK|1|EB|A|2883
6BOK|1|EB|U|2884
6BOK|1|EB|C|2885
6BOK|1|EB|G|2886
Current chains
- Chain EB
- 23S ribosomal RNA
Nearby chains
- Chain FC
- 50S ribosomal protein L32
- Chain IB
- 50S ribosomal protein L3
- Chain RB
- 50S ribosomal protein L17
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