J3_6BY1_003
3D structure
- PDB id
- 6BY1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli pH03H9 complex
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.94 Å
Loop
- Sequence
- UA*UACCGGUGG*CGG
- Length
- 14 nucleotides
- Bulged bases
- 6BY1|1|AA|U|723
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6BY1_003 not in the Motif Atlas
- Homologous match to J3_6CZR_017
- Geometric discrepancy: 0.1359
- The information below is about J3_6CZR_017
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_11934.3
- Basepair signature
- cWW-F-cWW-F-F-tWW-F-cWW-F
- Number of instances in this motif group
- 5
Unit IDs
6BY1|1|AA|U|672
6BY1|1|AA|A|673
*
6BY1|1|AA|U|717
6BY1|1|AA|A|718
6BY1|1|AA|C|719
6BY1|1|AA|C|720
6BY1|1|AA|G|721
6BY1|1|AA|G|722
6BY1|1|AA|U|723
6BY1|1|AA|G|724
6BY1|1|AA|G|725
*
6BY1|1|AA|C|732
6BY1|1|AA|G|733
6BY1|1|AA|G|734
Current chains
- Chain AA
- 16S ribosomal RNA
Nearby chains
- Chain AF
- 30S ribosomal protein S6
- Chain AK
- 30S ribosomal protein S11
- Chain AO
- 30S ribosomal protein S15
- Chain AR
- 30S ribosomal protein S18
- Chain AX
- Messenger RNA
- Chain CC
- 50S ribosomal protein L2
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