J3_6BY1_012
3D structure
- PDB id
- 6BY1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli pH03H9 complex
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.94 Å
Loop
- Sequence
- UAU*AGAC*GGUG
- Length
- 11 nucleotides
- Bulged bases
- 6BY1|1|AA|U|1183
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6BY1_012 not in the Motif Atlas
- Geometric match to J3_8C3A_043
- Geometric discrepancy: 0.2071
- The information below is about J3_8C3A_043
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_82365.3
- Basepair signature
- cWW-F-F-F-cWW-cWW-F
- Number of instances in this motif group
- 4
Unit IDs
6BY1|1|AA|U|1116
6BY1|1|AA|A|1117
6BY1|1|AA|U|1118
*
6BY1|1|AA|A|1155
6BY1|1|AA|G|1156
6BY1|1|AA|A|1157
6BY1|1|AA|C|1158
*
6BY1|1|AA|G|1181
6BY1|1|AA|G|1182
6BY1|1|AA|U|1183
6BY1|1|AA|G|1184
Current chains
- Chain AA
- 16S ribosomal RNA
Nearby chains
- Chain AB
- 30S ribosomal protein S2
- Chain AG
- 30S ribosomal protein S7
- Chain AI
- 30S ribosomal protein S9
- Chain AJ
- 30S ribosomal protein S10
- Chain AN
- 30S ribosomal protein S14
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