J3_6BZ6_008

3D structure

PDB id

6BZ6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermus thermophilus 70S complex containing 16S G347U ram mutation and empty A site

Experimental method

X-RAY DIFFRACTION

Resolution

3.18 Å

Loop

Sequence

CUUGACAU*ACAG*CUUACG

Length

18 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_6BZ6_008 not in the Motif Atlas

Homologous match to J3_4LFB_016

Geometric discrepancy: 0.1675

The information below is about J3_4LFB_016

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_28881.1

Basepair signature

cWW-tWH-F-F-cWW-cWW-F-F-F-cWS-cWW

Number of instances in this motif group

2

Unit IDs

6BZ6|1|QA|C|990
6BZ6|1|QA|U|991
6BZ6|1|QA|U|992
6BZ6|1|QA|G|993
6BZ6|1|QA|A|994
6BZ6|1|QA|C|995
6BZ6|1|QA|A|996
6BZ6|1|QA|U|997
*
6BZ6|1|QA|A|1044
6BZ6|1|QA|C|1045
6BZ6|1|QA|A|1046
6BZ6|1|QA|G|1047
*
6BZ6|1|QA|C|1210
6BZ6|1|QA|U|1211
6BZ6|1|QA|U|1212
6BZ6|1|QA|A|1213
6BZ6|1|QA|C|1214
6BZ6|1|QA|G|1215

Current chains

Chain QA

16S rRNA

Nearby chains

Chain QN

30S ribosomal protein S14 type Z

Chain YA

Large subunit ribosomal RNA; LSU rRNA