3D structure

PDB id
6BZ7 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Thermus thermophilus 70S containing 16S G299A point mutation and near-cognate ASL Leucine in A site.
Experimental method
X-RAY DIFFRACTION
Resolution
3.68 Å

Loop

Sequence
CGUCAG*CGCAACC*GACGACG
Length
20 nucleotides
Bulged bases
6BZ7|1|QA|G|1190
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J3_6BZ7_010 not in the Motif Atlas
Geometric match to J3_6CZR_023
Geometric discrepancy: 0.1719
The information below is about J3_6CZR_023
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J3_08394.2
Basepair signature
cWW-F-F-F-tHW-F-F-F-tSS-F-cWW-cWW-F-F-F
Number of instances in this motif group
3

Unit IDs

6BZ7|1|QA|C|1063
6BZ7|1|QA|G|1064
6BZ7|1|QA|U|1065
6BZ7|1|QA|C|1066
6BZ7|1|QA|A|1067
6BZ7|1|QA|G|1068
*
6BZ7|1|QA|C|1107
6BZ7|1|QA|G|1108
6BZ7|1|QA|C|1109
6BZ7|1|QA|A|1110
6BZ7|1|QA|A|1111
6BZ7|1|QA|C|1112
6BZ7|1|QA|C|1113
*
6BZ7|1|QA|G|1187
6BZ7|1|QA|A|1188
6BZ7|1|QA|C|1189
6BZ7|1|QA|G|1190
6BZ7|1|QA|A|1191
6BZ7|1|QA|C|1192
6BZ7|1|QA|G|1193

Current chains

Chain QA
16S rRNA

Nearby chains

Chain QB
30S ribosomal protein S2
Chain QC
30S ribosomal protein S3
Chain QE
30S ribosomal protein S5
Chain QG
30S ribosomal protein S7
Chain QI
30S ribosomal protein S9
Chain QJ
30S ribosomal protein S10
Chain QN
30S ribosomal protein S14 type Z

Coloring options:


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