J3_6BZ7_019

3D structure

PDB id

6BZ7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermus thermophilus 70S containing 16S G299A point mutation and near-cognate ASL Leucine in A site.

Experimental method

X-RAY DIFFRACTION

Resolution

3.68 Å

Loop

Sequence

GGA*UUUAAAG*CAC

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_6BZ7_019 not in the Motif Atlas

Homologous match to J3_6PRV_001

Geometric discrepancy: 0.5777

The information below is about J3_6PRV_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_28621.5

Basepair signature

cWW-tSS-cSS-tSH-cWW-cWW-tWW-F-F

Number of instances in this motif group

7

Unit IDs

6BZ7|1|RA|G|1055
6BZ7|1|RA|G|1056
6BZ7|1|RA|A|1057
*
6BZ7|1|RA|U|1081
6BZ7|1|RA|U|1082
6BZ7|1|RA|U|1083
6BZ7|1|RA|A|1084
6BZ7|1|RA|A|1085
6BZ7|1|RA|A|1086
6BZ7|1|RA|G|1087
*
6BZ7|1|RA|C|1102
6BZ7|1|RA|A|1103
6BZ7|1|RA|C|1104

Current chains

Chain RA

23S rRNA

Nearby chains

Chain R9

50S ribosomal protein L36