J3_6BZ7_032

3D structure

PDB id

6BZ7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermus thermophilus 70S containing 16S G299A point mutation and near-cognate ASL Leucine in A site.

Experimental method

X-RAY DIFFRACTION

Resolution

3.68 Å

Loop

Sequence

CUAG*CGAAG*CGUUAAG

Length

16 nucleotides

Bulged bases

6BZ7|1|XA|U|871

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_6BZ7_032 not in the Motif Atlas

Homologous match to J3_4LFB_001

Geometric discrepancy: 0.1814

The information below is about J3_4LFB_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_85054.4

Basepair signature

cWW-tWW-tHS-F-cWW-tHS-cWW-F

Number of instances in this motif group

3

Unit IDs

6BZ7|1|XA|C|826
6BZ7|1|XA|U|827
6BZ7|1|XA|A|828
6BZ7|1|XA|G|829
*
6BZ7|1|XA|C|857
6BZ7|1|XA|G|858
6BZ7|1|XA|A|859
6BZ7|1|XA|A|860
6BZ7|1|XA|G|861
*
6BZ7|1|XA|C|868
6BZ7|1|XA|G|869
6BZ7|1|XA|U|870
6BZ7|1|XA|U|871
6BZ7|1|XA|A|872
6BZ7|1|XA|A|873
6BZ7|1|XA|G|874

Current chains

Chain XA

16S rRNA

Nearby chains

Chain XB

30S ribosomal protein S2

Chain XH

30S ribosomal protein S8