J3_6BZ7_062
3D structure
- PDB id
- 6BZ7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Thermus thermophilus 70S containing 16S G299A point mutation and near-cognate ASL Leucine in A site.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.68 Å
Loop
- Sequence
- GC*GUGAAAAGAAC*GAGUGAAAUAGAGCC
- Length
- 28 nucleotides
- Bulged bases
- 6BZ7|1|RA|U|504, 6BZ7|1|RA|G|508
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6BZ7_062 not in the Motif Atlas
- Homologous match to J3_9DFE_002
- Geometric discrepancy: 0.1073
- The information below is about J3_9DFE_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_92134.2
- Basepair signature
- cWW-cWW-cWW-F-tWH-cSS-tSS-tSH-tSH-tWW-tHH-tWH-tWW-F-F-cSS-cSW-F-tHS-cWW
- Number of instances in this motif group
- 6
Unit IDs
6BZ7|1|RA|G|30
6BZ7|1|RA|C|31
*
6BZ7|1|RA|G|474
6BZ7|1|RA|U|475
6BZ7|1|RA|G|476
6BZ7|1|RA|A|477
6BZ7|1|RA|A|478
6BZ7|1|RA|A|479
6BZ7|1|RA|A|480
6BZ7|1|RA|G|481
6BZ7|1|RA|A|482
6BZ7|1|RA|A|483
6BZ7|1|RA|C|484
*
6BZ7|1|RA|G|496
6BZ7|1|RA|A|497
6BZ7|1|RA|G|498
6BZ7|1|RA|U|499
6BZ7|1|RA|G|500
6BZ7|1|RA|A|501
6BZ7|1|RA|A|502
6BZ7|1|RA|A|503
6BZ7|1|RA|U|504
6BZ7|1|RA|A|505
6BZ7|1|RA|G|506
6BZ7|1|RA|A|507
6BZ7|1|RA|G|508
6BZ7|1|RA|C|509
6BZ7|1|RA|C|510
Current chains
- Chain RA
- 23S rRNA
Nearby chains
- Chain RU
- 50S ribosomal protein L20
- Chain RW
- 50S ribosomal protein L22
- Chain RX
- 50S ribosomal protein L23
- Chain RY
- 50S ribosomal protein L24
Coloring options: