J3_6BZ8_004

3D structure

PDB id

6BZ8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermus thermophilus 70S containing 16S G347U point mutation and near-cognate ASL Leucine in A site

Experimental method

X-RAY DIFFRACTION

Resolution

3.74 Å

Loop

Sequence

CUAG*CGAAG*CGUUAAG

Length

16 nucleotides

Bulged bases

6BZ8|1|QA|U|871

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_6BZ8_004 not in the Motif Atlas

Homologous match to J3_4LFB_001

Geometric discrepancy: 0.1689

The information below is about J3_4LFB_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_85054.4

Basepair signature

cWW-tWW-tHS-F-cWW-tHS-cWW-F

Number of instances in this motif group

3

Unit IDs

6BZ8|1|QA|C|826
6BZ8|1|QA|U|827
6BZ8|1|QA|A|828
6BZ8|1|QA|G|829
*
6BZ8|1|QA|C|857
6BZ8|1|QA|G|858
6BZ8|1|QA|A|859
6BZ8|1|QA|A|860
6BZ8|1|QA|G|861
*
6BZ8|1|QA|C|868
6BZ8|1|QA|G|869
6BZ8|1|QA|U|870
6BZ8|1|QA|U|871
6BZ8|1|QA|A|872
6BZ8|1|QA|A|873
6BZ8|1|QA|G|874

Current chains

Chain QA

16S rRNA

Nearby chains

Chain QB

30S ribosomal protein S2

Chain QH

30S ribosomal protein S8