J3_6BZ8_066

3D structure

PDB id

6BZ8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermus thermophilus 70S containing 16S G347U point mutation and near-cognate ASL Leucine in A site

Experimental method

X-RAY DIFFRACTION

Resolution

3.74 Å

Loop

Sequence

GCCUAAG*UAGGAAUCU*AGC

Length

19 nucleotides

Bulged bases

6BZ8|1|XA|C|48, 6BZ8|1|XA|A|50, 6BZ8|1|XA|A|51

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_6BZ8_066 not in the Motif Atlas

Homologous match to J3_4LFB_014

Geometric discrepancy: 0.0831

The information below is about J3_4LFB_014

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_46317.4

Basepair signature

cWW-cWW-cSW-F-cWW-F-F-F-F-cWW-F-F-F-F

Number of instances in this motif group

4

Unit IDs

6BZ8|1|XA|G|46
6BZ8|1|XA|C|47
6BZ8|1|XA|C|48
6BZ8|1|XA|U|49
6BZ8|1|XA|A|50
6BZ8|1|XA|A|51
6BZ8|1|XA|G|52
*
6BZ8|1|XA|U|359
6BZ8|1|XA|A|360
6BZ8|1|XA|G|361
6BZ8|1|XA|G|362
6BZ8|1|XA|A|363
6BZ8|1|XA|A|364
6BZ8|1|XA|U|365
6BZ8|1|XA|C|366
6BZ8|1|XA|U|367
*
6BZ8|1|XA|A|393
6BZ8|1|XA|G|394
6BZ8|1|XA|C|395

Current chains

Chain XA

16S rRNA

Nearby chains

Chain XL

30S ribosomal protein S12

Chain XP

30S ribosomal protein S16