J3_6CZR_044
3D structure
- PDB id
- 6CZR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The structure of amicetin bound to the 70S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.14 Å
Loop
- Sequence
- CUAG*CGAAG*CGUUAAG
- Length
- 16 nucleotides
- Bulged bases
- 6CZR|1|2a|U|849, 6CZR|1|2a|A|851
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6CZR_044 not in the Motif Atlas
- Homologous match to J3_4LFB_001
- Geometric discrepancy: 0.1145
- The information below is about J3_4LFB_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_85054.4
- Basepair signature
- cWW-tWW-tHS-F-cWW-tHS-cWW-F
- Number of instances in this motif group
- 3
Unit IDs
6CZR|1|2a|C|810
6CZR|1|2a|U|811
6CZR|1|2a|A|812
6CZR|1|2a|G|813
*
6CZR|1|2a|C|835
6CZR|1|2a|G|836
6CZR|1|2a|A|837
6CZR|1|2a|A|838
6CZR|1|2a|G|839
*
6CZR|1|2a|C|846
6CZR|1|2a|G|847
6CZR|1|2a|U|848
6CZR|1|2a|U|849
6CZR|1|2a|A|850
6CZR|1|2a|A|851
6CZR|1|2a|G|852
Current chains
- Chain 2a
- 16S Ribosomal RNA
Nearby chains
- Chain 2b
- 30S ribosomal protein S2
- Chain 2h
- 30S ribosomal protein S8
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