J3_6ENJ_007

3D structure

PDB id

6ENJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Polyproline-stalled ribosome in the presence of A+P site tRNA and elongation-factor P (EF-P)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

CAAG*CCCAAAC*GUG

Length

14 nucleotides

Bulged bases

6ENJ|1|A|A|1609

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_6ENJ_007 not in the Motif Atlas

Homologous match to J3_7A0S_007

Geometric discrepancy: 0.1357

The information below is about J3_7A0S_007

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_47341.1

Basepair signature

cWW-tHH-F-tHW-tHS-tWW-cWW-cWW-F

Number of instances in this motif group

4

Unit IDs

6ENJ|1|A|C|1306
6ENJ|1|A|A|1307
6ENJ|1|A|A|1308
6ENJ|1|A|G|1309
*
6ENJ|1|A|C|1605
6ENJ|1|A|C|1606
6ENJ|1|A|C|1607
6ENJ|1|A|A|1608
6ENJ|1|A|A|1609
6ENJ|1|A|A|1610
6ENJ|1|A|C|1611
*
6ENJ|1|A|G|1620
6ENJ|1|A|U|1621
6ENJ|1|A|G|1622

Current chains

Chain A

23S Ribosomal RNA

Nearby chains

Chain 2

50S ribosomal protein L34