J3_6ENJ_034

3D structure

PDB id

6ENJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Polyproline-stalled ribosome in the presence of A+P site tRNA and elongation-factor P (EF-P)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

CAUC*GUAU*AUUUAAAG

Length

16 nucleotides

Bulged bases

6ENJ|1|A|A|2518, 6ENJ|1|A|U|2519

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_6ENJ_034 not in the Motif Atlas

Geometric match to J3_4V9F_009

Geometric discrepancy: 0.3036

The information below is about J3_4V9F_009

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_69441.1

Basepair signature

cWW-cWW-tWH-cHW-tSH-cWW-tSS-F-cSS-cWW

Number of instances in this motif group

1

Unit IDs

6ENJ|1|A|C|2517
6ENJ|1|A|A|2518
6ENJ|1|A|U|2519
6ENJ|1|A|C|2520
*
6ENJ|1|A|G|2545
6ENJ|1|A|U|2546
6ENJ|1|A|A|2547
6ENJ|1|A|U|2548
*
6ENJ|1|A|A|2560
6ENJ|1|A|U|2561
6ENJ|1|A|U|2562
6ENJ|1|A|U|2563
6ENJ|1|A|A|2564
6ENJ|1|A|A|2565
6ENJ|1|A|A|2566
6ENJ|1|A|G|2567

Current chains

Chain A

23S Ribosomal RNA

Nearby chains

Chain D

50S ribosomal protein L3

Chain K

50S ribosomal protein L14