J3_6ERI_018
3D structure
- PDB id
- 6ERI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the chloroplast ribosome with chl-RRF and hibernation-promoting factor
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- GG*CACCAACGG*CAC
- Length
- 14 nucleotides
- Bulged bases
- 6ERI|1|BA|C|672
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6ERI_018 not in the Motif Atlas
- Homologous match to J3_5J7L_003
- Geometric discrepancy: 0.2053
- The information below is about J3_5J7L_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_11934.4
- Basepair signature
- cWW-cWW-tWW-cWW-F-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
6ERI|1|BA|G|621
6ERI|1|BA|G|622
*
6ERI|1|BA|C|666
6ERI|1|BA|A|667
6ERI|1|BA|C|668
6ERI|1|BA|C|669
6ERI|1|BA|A|670
6ERI|1|BA|A|671
6ERI|1|BA|C|672
6ERI|1|BA|G|673
6ERI|1|BA|G|674
*
6ERI|1|BA|C|681
6ERI|1|BA|A|682
6ERI|1|BA|C|683
Current chains
- Chain BA
- 16S ribosomal RNA
Nearby chains
- Chain BF
- 30S ribosomal protein S6 alpha, chloroplastic
- Chain BK
- 30S ribosomal protein S11, chloroplastic
- Chain BR
- 30S ribosomal protein S18, chloroplastic
- Chain BU
- 30S ribosomal protein S21, chloroplastic
Coloring options: