J3_6FRK_023

3D structure

PDB id

6FRK (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a prehandover mammalian ribosomal SRP and SRP receptor targeting complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

CAGCG*CGUACG*CCGG

Length

15 nucleotides

Bulged bases

6FRK|1|5|C|159

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6FRK|1|5|C|112
6FRK|1|5|A|113
6FRK|1|5|G|114
6FRK|1|5|C|115
6FRK|1|5|G|116
*
6FRK|1|5|C|155
6FRK|1|5|G|156
6FRK|1|5|U|157
6FRK|1|5|A|158
6FRK|1|5|C|159
6FRK|1|5|G|160
*
6FRK|1|5|C|275
6FRK|1|5|C|276
6FRK|1|5|G|277
6FRK|1|5|G|278

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain G

Ribosomal protein eL8

Chain L

Ribosomal protein eL13

Chain N

Ribosomal protein L15

Chain h

Ribosomal protein uL29

Chain i

Ribosomal protein eL36