J3_6FRK_030
3D structure
- PDB id
- 6FRK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a prehandover mammalian ribosomal SRP and SRP receptor targeting complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- AGAUGG*CGUUCCGAAGGG*CGGCCGAU
- Length
- 26 nucleotides
- Bulged bases
- 6FRK|1|5|A|2472, 6FRK|1|5|G|2475
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6FRK|1|5|A|2451
6FRK|1|5|G|2452
6FRK|1|5|A|2453
6FRK|1|5|U|2454
6FRK|1|5|G|2455
6FRK|1|5|G|2456
*
6FRK|1|5|C|2465
6FRK|1|5|G|2466
6FRK|1|5|U|2467
6FRK|1|5|U|2468
6FRK|1|5|C|2469
6FRK|1|5|C|2470
6FRK|1|5|G|2471
6FRK|1|5|A|2472
6FRK|1|5|A|2473
6FRK|1|5|G|2474
6FRK|1|5|G|2475
6FRK|1|5|G|2476
*
6FRK|1|5|C|2501
6FRK|1|5|G|2502
6FRK|1|5|G|2503
6FRK|1|5|C|2504
6FRK|1|5|C|2505
6FRK|1|5|G|2506
6FRK|1|5|A|2507
6FRK|1|5|U|2508
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain 8
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain A
- Ribosomal protein L8
- Chain G
- Ribosomal protein eL8
- Chain N
- Ribosomal protein L15
- Chain X
- Ribosomal protein uL23
- Chain j
- Ribosomal protein L37
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