3D structure

PDB id
6FTG (explore in PDB, NAKB, or RNA 3D Hub)
Description
Subtomogram average of OST-containing ribosome-translocon complexes from canine rough microsomal membranes
Experimental method
ELECTRON MICROSCOPY
Resolution
9.1 Å

Loop

Sequence
CAGCG*CGUACG*CCGG
Length
15 nucleotides
Bulged bases
6FTG|1|u|C|159
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6FTG|1|u|C|112
6FTG|1|u|A|113
6FTG|1|u|G|114
6FTG|1|u|C|115
6FTG|1|u|G|116
*
6FTG|1|u|C|155
6FTG|1|u|G|156
6FTG|1|u|U|157
6FTG|1|u|A|158
6FTG|1|u|C|159
6FTG|1|u|G|160
*
6FTG|1|u|C|275
6FTG|1|u|C|276
6FTG|1|u|G|277
6FTG|1|u|G|278

Current chains

Chain u
28S ribosomal RNA

Nearby chains

Chain G
eL8
Chain L
eL13
Chain N
Ribosomal protein L15
Chain h
eL29
Chain i
60S ribosomal protein L36

Coloring options:

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