J3_6GSL_024
3D structure
- PDB id
- 6GSL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAArg in the A-site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.16 Å
Loop
- Sequence
- CC*GUGGAU*AAUCG
- Length
- 13 nucleotides
- Bulged bases
- 6GSL|1|14|G|2833
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6GSL_024 not in the Motif Atlas
- Homologous match to J3_9DFE_019
- Geometric discrepancy: 0.1434
- The information below is about J3_9DFE_019
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_76911.2
- Basepair signature
- cWW-tHS-F-F-F-cWW-cWW
- Number of instances in this motif group
- 4
Unit IDs
6GSL|1|14|C|2814
6GSL|1|14|C|2815
*
6GSL|1|14|G|2831
6GSL|1|14|U|2832
6GSL|1|14|G|2833
6GSL|1|14|G|2834
6GSL|1|14|A|2835
6GSL|1|14|U|2836
*
6GSL|1|14|A|2882
6GSL|1|14|A|2883
6GSL|1|14|U|2884
6GSL|1|14|C|2885
6GSL|1|14|G|2886
Current chains
- Chain 14
- 23S ribosomal RNA
Nearby chains
- Chain 29
- 50S ribosomal protein L3
- Chain 55
- 50S ribosomal protein L17
- Chain 75
- 50S ribosomal protein L19
- Chain J5
- 50S ribosomal protein L32
Coloring options: