J3_6GXM_021
3D structure
- PDB id
- 6GXM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of an E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and Pint-tRNA (State II)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- CUUG*CAG*CUUACG
- Length
- 13 nucleotides
- Bulged bases
- 6GXM|1|a|C|1214
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6GXM_021 not in the Motif Atlas
- Homologous match to J3_4LFB_005
- Geometric discrepancy: 0.172
- The information below is about J3_4LFB_005
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_84394.1
- Basepair signature
- cWW-tWH-F-F-cWW-F-cWW-F
- Number of instances in this motif group
- 2
Unit IDs
6GXM|1|a|C|990
6GXM|1|a|U|991
6GXM|1|a|U|992
6GXM|1|a|G|993
*
6GXM|1|a|C|1045
6GXM|1|a|A|1046
6GXM|1|a|G|1047
*
6GXM|1|a|C|1210
6GXM|1|a|U|1211
6GXM|1|a|U|1212
6GXM|1|a|A|1213
6GXM|1|a|C|1214
6GXM|1|a|G|1215
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
- Chain n
- 30S ribosomal protein S14
- Chain v
- Peptide chain release factor RF1
Coloring options: