J3_6GZZ_050
3D structure
- PDB id
- 6GZZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- T. thermophilus hibernating 100S ribosome (amc)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.13 Å
Loop
- Sequence
- CGG*CUAGA*UGACG
- Length
- 13 nucleotides
- Bulged bases
- 6GZZ|1|A3|A|636
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6GZZ_050 not in the Motif Atlas
- Homologous match to J3_4LFB_015
- Geometric discrepancy: 0.2256
- The information below is about J3_4LFB_015
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_17385.4
- Basepair signature
- cWW-F-cWW-cWW-tWH-tHS-cWW
- Number of instances in this motif group
- 6
Unit IDs
6GZZ|1|A3|C|569
6GZZ|1|A3|G|570
6GZZ|1|A3|G|571
*
6GZZ|1|A3|C|634
6GZZ|1|A3|U|635
6GZZ|1|A3|A|636
6GZZ|1|A3|G|637
6GZZ|1|A3|A|638
*
6GZZ|1|A3|U|734
6GZZ|1|A3|G|735
6GZZ|1|A3|A|736
6GZZ|1|A3|C|737
6GZZ|1|A3|G|738
Current chains
- Chain A3
- 16S ribosomal RNA
Nearby chains
- Chain H3
- 30S ribosomal protein S8
- Chain L3
- 30S ribosomal protein S12
- Chain O3
- 30S ribosomal protein S15
- Chain Q3
- 30S ribosomal protein S17
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