J3_6H58_016
3D structure
- PDB id
- 6H58 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - Full 100S Hibernating E. coli Ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 7.9 Å
Loop
- Sequence
- UGAUCUA*UGG*CAAA
- Length
- 14 nucleotides
- Bulged bases
- 6H58|1|AA|U|686, 6H58|1|AA|A|792
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6H58_016 not in the Motif Atlas
- Homologous match to J3_8VTW_001
- Geometric discrepancy: 0.3514
- The information below is about J3_8VTW_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_39238.5
- Basepair signature
- cWW-tWH-cWW-tSW-F-F-cWW
- Number of instances in this motif group
- 7
Unit IDs
6H58|1|AA|U|683
6H58|1|AA|G|684
6H58|1|AA|A|685
6H58|1|AA|U|686
6H58|1|AA|C|687
6H58|1|AA|U|688
6H58|1|AA|A|689
*
6H58|1|AA|U|773
6H58|1|AA|G|774
6H58|1|AA|G|775
*
6H58|1|AA|C|791
6H58|1|AA|A|792
6H58|1|AA|A|793
6H58|1|AA|A|794
Current chains
- Chain AA
- 23S ribosomal RNA
Nearby chains
- Chain 22
- 50S ribosomal protein L34
- Chain CC
- 50S ribosomal protein L2
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