J3_6HTQ_017
3D structure
- PDB id
- 6HTQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Stringent response control by a bifunctional RelA enzyme in the presence and absence of the ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.5 Å
Loop
- Sequence
- CAAG*CUAGUAA*UGAAUACG
- Length
- 19 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6HTQ_017 not in the Motif Atlas
- Homologous match to J3_4LFB_002
- Geometric discrepancy: 0.1299
- The information below is about J3_4LFB_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_85722.1
- Basepair signature
- cWW-F-F-cSS-F-cWW-tHH-tWW-F-tWH-tHS-cSH-cWW
- Number of instances in this motif group
- 5
Unit IDs
6HTQ|1|a|C|946
6HTQ|1|a|A|947
6HTQ|1|a|A|948
6HTQ|1|a|G|949
*
6HTQ|1|a|C|1353
6HTQ|1|a|U|1354
6HTQ|1|a|A|1355
6HTQ|1|a|G|1356
6HTQ|1|a|U|1357
6HTQ|1|a|A|1358
6HTQ|1|a|A|1359
*
6HTQ|1|a|U|1381
6HTQ|1|a|G|1382
6HTQ|1|a|A|1383
6HTQ|1|a|A|1384
6HTQ|1|a|U|1385
6HTQ|1|a|A|1386
6HTQ|1|a|C|1387
6HTQ|1|a|G|1388
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain g
- 30S ribosomal protein S7
- Chain i
- 30S ribosomal protein S9
- Chain w
- Transfer RNA; tRNA
Coloring options: