J3_6HTQ_040
3D structure
- PDB id
- 6HTQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Stringent response control by a bifunctional RelA enzyme in the presence and absence of the ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.5 Å
Loop
- Sequence
- CCAG*CGAAC*GAUGAG
- Length
- 15 nucleotides
- Bulged bases
- 6HTQ|1|A|A|811
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6HTQ_040 not in the Motif Atlas
- Geometric match to J3_8P9A_050
- Geometric discrepancy: 0.2637
- The information below is about J3_8P9A_050
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_21998.1
- Basepair signature
- cWW-tSH-F-F-tHS-cWW-cWW-F-F
- Number of instances in this motif group
- 1
Unit IDs
6HTQ|1|A|C|744
6HTQ|1|A|C|745
6HTQ|1|A|A|746
6HTQ|1|A|G|747
*
6HTQ|1|A|C|779
6HTQ|1|A|G|780
6HTQ|1|A|A|781
6HTQ|1|A|A|782
6HTQ|1|A|C|783
*
6HTQ|1|A|G|807
6HTQ|1|A|A|808
6HTQ|1|A|U|809
6HTQ|1|A|G|810
6HTQ|1|A|A|811
6HTQ|1|A|G|812
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain C
- 50S ribosomal protein L2
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