J3_6I7V_003

3D structure

PDB id

6I7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosomal protein paralogs bL31 and bL36

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

CUUG*CGGAG*CGUUAAG

Length

16 nucleotides

Bulged bases

6I7V|1|AA|U|871

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_6I7V_003 not in the Motif Atlas

Homologous match to J3_5J7L_004

Geometric discrepancy: 0.0864

The information below is about J3_5J7L_004

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_85054.4

Basepair signature

cWW-tWW-tHS-F-cWW-tHS-cWW-F

Number of instances in this motif group

3

Unit IDs

6I7V|1|AA|C|826
6I7V|1|AA|U|827
6I7V|1|AA|U|828
6I7V|1|AA|G|829
*
6I7V|1|AA|C|857
6I7V|1|AA|G|858
6I7V|1|AA|G|859
6I7V|1|AA|A|860
6I7V|1|AA|G|861
*
6I7V|1|AA|C|868
6I7V|1|AA|G|869
6I7V|1|AA|U|870
6I7V|1|AA|U|871
6I7V|1|AA|A|872
6I7V|1|AA|A|873
6I7V|1|AA|G|874

Current chains

Chain AA

16S ribosmal RNA

Nearby chains

Chain AB

30S ribosomal protein S2

Chain AH

30S ribosomal protein S8

Chain AU

30S ribosomal protein S21