J3_6NSH_004
3D structure
- PDB id
- 6NSH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Modified ASL proline bound to Thermus thermophilus 70S (near-cognate)
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.4 Å
Loop
- Sequence
- CUAG*CGAAG*CGUUAAG
- Length
- 16 nucleotides
- Bulged bases
- 6NSH|1|QA|U|871
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6NSH_004 not in the Motif Atlas
- Homologous match to J3_4LFB_001
- Geometric discrepancy: 0.1641
- The information below is about J3_4LFB_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_02285.1
- Basepair signature
- cWW-tWW-tHS-F-cWW-tHS-cWW-F
- Number of instances in this motif group
- 2
Unit IDs
6NSH|1|QA|C|826
6NSH|1|QA|U|827
6NSH|1|QA|A|828
6NSH|1|QA|G|829
*
6NSH|1|QA|C|857
6NSH|1|QA|G|858
6NSH|1|QA|A|859
6NSH|1|QA|A|860
6NSH|1|QA|G|861
*
6NSH|1|QA|C|868
6NSH|1|QA|G|869
6NSH|1|QA|U|870
6NSH|1|QA|U|871
6NSH|1|QA|A|872
6NSH|1|QA|A|873
6NSH|1|QA|G|874
Current chains
- Chain QA
- 16S rRNA
Nearby chains
- Chain QB
- 30S ribosomal protein S2
- Chain QH
- 30S ribosomal protein S8
- Chain QX
- mRNA
Coloring options: