3D structure

PDB id
6NU3 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structural insights into unique features of the human mitochondrial ribosome recycling
Experimental method
ELECTRON MICROSCOPY
Resolution
4.4 Å

Loop

Sequence
CAUC*GUU*AUUAAAG
Length
14 nucleotides
Bulged bases
6NU3|1|A|A|3005, 6NU3|1|A|A|3051
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J3_6NU3_005 not in the Motif Atlas
Homologous match to J3_4WF9_009
Geometric discrepancy: 0.4325
The information below is about J3_4WF9_009
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J3_32601.6
Basepair signature
cWW-cWH-cWW-tWH-tSS-F-cWW-F
Number of instances in this motif group
4

Unit IDs

6NU3|1|A|C|3004
6NU3|1|A|A|3005
6NU3|1|A|U|3006
6NU3|1|A|C|3007
*
6NU3|1|A|G|3032
6NU3|1|A|U|3033
6NU3|1|A|U|3034
*
6NU3|1|A|A|3048
6NU3|1|A|U|3049
6NU3|1|A|U|3050
6NU3|1|A|A|3051
6NU3|1|A|A|3052
6NU3|1|A|A|3053
6NU3|1|A|G|3054

Current chains

Chain A
16S rRNA

Nearby chains

Chain E
39S ribosomal protein L3, mitochondrial
Chain L
39S ribosomal protein L14, mitochondrial
Chain r
39S ribosomal protein S18a, mitochondrial

Coloring options:


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