J3_6NUO_002

3D structure

PDB id

6NUO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Modified tRNA(Pro) bound to Thermus thermophilus 70S (cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

CGG*CUAG*CG

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_6NUO_002 not in the Motif Atlas

Geometric match to J3_4LFB_011

Geometric discrepancy: 0.1158

The information below is about J3_4LFB_011

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_56052.5

Basepair signature

cWW-F-cWW-cWW-F

Number of instances in this motif group

5

Unit IDs

6NUO|1|QA|C|586
6NUO|1|QA|G|587
6NUO|1|QA|G|588
*
6NUO|1|QA|C|651
6NUO|1|QA|U|652
6NUO|1|QA|A|653
6NUO|1|QA|G|654
*
6NUO|1|QA|C|754
6NUO|1|QA|G|755

Current chains

Chain QA

16S rRNA

Nearby chains

Chain QH

30S ribosomal protein S8

Chain QL

30S ribosomal protein S12

Chain QO

30S ribosomal protein S15

Chain QQ

30S ribosomal protein S17