J3_6NUO_020

3D structure

PDB id

6NUO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Modified tRNA(Pro) bound to Thermus thermophilus 70S (cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

GCGGGAC*GGCAG*CC

Length

14 nucleotides

Bulged bases

6NUO|1|RA|A|1430

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_6NUO_020 not in the Motif Atlas

Homologous match to J3_7RQB_009

Geometric discrepancy: 0.1051

The information below is about J3_7RQB_009

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_04858.2

Basepair signature

cWW-F-cWW-F-F-F-F-F-cWW

Number of instances in this motif group

3

Unit IDs

6NUO|1|RA|G|1390
6NUO|1|RA|C|1391
6NUO|1|RA|G|1392
6NUO|1|RA|G|1393
6NUO|1|RA|G|1394
6NUO|1|RA|A|1395
6NUO|1|RA|C|1396
*
6NUO|1|RA|G|1427
6NUO|1|RA|G|1428
6NUO|1|RA|C|1429
6NUO|1|RA|A|1430
6NUO|1|RA|G|1431
*
6NUO|1|RA|C|1448
6NUO|1|RA|C|1449

Current chains

Chain RA

23S rRNA

Nearby chains

Chain RX

50S ribosomal protein L23